Porting FAMOUS to HECToR
FAMOUS files were copied over to /work/n02/n02/annette/famous
.
Update 25/11/08: 4.5.3 on HECToR with now does compilation in the serial queue. Pathsacle supports data archiving, but this currently does not work for PGI.
To switch on archiving:
Remove: $MODS_SCRIPTS/hector_sub.mod
Include:
$MODS_SCRIPTS/um_archive45_hector.mod
$MODS_SCRIPTS/script_fix.mod
$MODS_SCRIPTS/gsm2u406_pum.pbs
Add: ARCHIVE_DIR $DATA_DIR/um_archive/$RUNID
Include: $MODS/general/xt4_archive.mod
- Post Processing → Main Switch + General Questions
Automatic post-processing required: Yes
- Atmos/Ocean → Control → Dumping & Meaning
Restart dumps every: 180 days
Archiving every: 2
Starting at the: 2
These are the changes made to a QUEST cluster FAMOUS job to run on HECToR with pathscale compiler. For a PGI job on HECToR see differences between pathscale and PGI.
- User Information and Target Machine → General details:
machine: login.hector.ac.uk
tic code: n02-qesm
user-id: annette
- Script Inserts and Modifications:
Remove variable: RUNNING_SCRIPT=yes
Remove all and add $MODS_SCRIPTS/hector_sub.mod
- File & Directory Naming:
FAMOUS_DIR: /work/n02/n02/annette/famous
FAMOUS_DATA: /work/n02/n02/annette/famous
DATA_DIR: /work/n02/n02/annette/um
FAMOUS_ANCIL: $FAMOUS_DATA/ancil
- Job submission:
submission method: ‘qsub’ for PBS Pro (CRAY XT4)
cores per node: 2
- User-defined compile option overrides:
override files: OFF
- Compilation and Modifications → Modifications for the reconfiguration:
$MODS/general/abort.mod: Y
- Post Processing → Local post-processing scripts:
Remove /home/famous/bin/quest_queue.sh
Add /home/jeff/umui_jobs/hand_edits/notrap45
(This fixes problem of creating temp directories that sometimes occcurs).
- Ocean GCM → STASH → Initialisation of User Prognostics:
/work/n02/n02/annette/famous/qrparm.mask_sal.xcggb
- Ocean GCM → Diagnostics, STASH excluded → MEAD Diagnostics:
Running with MEAD diagnostics: ON